Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs12529514 chr6:14096658 A/G 0.000124 289 25.58 30.1 4.07 KM Plot
KIRP rs12529582 chr6:148628519 T/C 1.93E-5 284 26.37 19.63 17.13 KM Plot
KIRP rs12560373 chr13:108427879 C/T 3.39E-5 285 26.7 19.95 13.27 KM Plot
KIRP rs12560693 chr13:108427904 T/A 3.39E-5 285 26.7 19.95 13.27 KM Plot
KIRP rs12569788 chr10:74901265 G/T 9.99E-15 288 26.37 22.8 5.6 KM Plot
KIRP rs12570782 chr10:75040191 G/T 0 287 26 25.23 4.07 KM Plot
KIRP rs12571390 chr10:74893932 A/G 9.77E-15 288 26.37 21.97 5.6 KM Plot
KIRP rs12571454 chr10:75208955 A/G 8.33E-15 289 26.2 24.43 5.6 KM Plot
KIRP rs12572146 chr10:74880609 T/C 9.77E-15 288 26.37 21.97 5.6 KM Plot
KIRP rs12573407 chr10:75048826 G/A 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs12574558 chr11:47069748 G/A 7.93E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs12576831 chr11:47082255 G/T 9.01E-12 287 25.57 29.8 10.82 KM Plot
KIRP rs12576839 chr11:47082464 C/T 1.0E-11 286 25.4 29.8 10.82 KM Plot
KIRP rs12588423 chr14:69409177 T/A 2.77E-5 282 25.97 22.9 6.1 KM Plot
KIRP rs12594469 chr15:25708779 A/G 0.000168 289 23.32 28.03 21.12 KM Plot